Allergome - Alt s 1

Last update: May 26, 2023
08:28 +1GMT

Alt s 1

Homo sapiens

Molecule name

Alt s 1

Sequence

Name

Description

Reference

IUIS

Alt s 1

Complete

Alt s 1 - B2MU61

10 SLFAAAGLAA	20 AAPLETRQDT	30 ASCPVSTQGD	40 YVWKISEFYG	50 RKPEGTYYNS
60 LGFNIKATNG	70 GTLDFTCSAS	80 ADKLEDHKWY	90 SCGENSFMDF	100 SFDSDRSGLL
110 LKQKVSDDIT	120 YVATTTLPNY	130 CRAGGNGPKD	FVCNGVS

Advanced option

Algorithm

Database

% Identity (BLAST)
% Similarity (FASTA) min max

ktup:1 (more sensitive)
2 (faster)

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Name

Description

Reference

IUIS

Alt s 1

Complete

Alt s 1 - M5BE71

10 TTIASLFAAA	20 GLAAAAPLET	30 RQDTASCPVS	40 TQGDYVWKIS	50 EFYGRKPEGT
60 YYNSLGFNIK	70 ATNGGTLDFT	80 CSASADKLED	90 HKWYSCGENS	100 FMDFSFDSDR
110 SGLLLKQKVS	120 DDITYVATTT	LPNYC

Advanced option

Algorithm

Database

% Identity (BLAST)
% Similarity (FASTA) min max

ktup:1 (more sensitive)
2 (faster)

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Name

Description

Reference

IUIS

Alt s 1

Complete

Alt s 1 - M5BEI0

10 TIASLFAAAG	20 LAAAAPLETR	30 QDTASCPVST	40 QGDYVWKISE	50 FYGRKPEGTY
60 YNSLGFNIKA	70 TNGGTLDFTC	80 SASADKLEDH	90 KWYSCGENSF	100 MDFSFDSDRS
110 GLLLKQKVSD	120 DITYVATTTL	130 PNYCRAGGNG	140 PKDFVCNGVS	DA

Advanced option

Algorithm

Database

% Identity (BLAST)
% Similarity (FASTA) min max

ktup:1 (more sensitive)
2 (faster)

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Name

Description

Reference

IUIS

Alt s 1

Complete

Alt s 1 - M5BEH6

10 IASLFAAAGL	20 AAAAPLETRQ	30 DTASCPVSTQ	40 GDYVWKISEF	50 YGRKPEGTYY
60 NSLGFNIKAT	70 NGGTLDFTCS	80 ASADKLEDHK	90 WYSCGENSFM	100 DFSFDSDRSG
110 LLLKQKVSDD	120 ITYVATTTLP	130 NYCRAGGNGP	140 KDFVCNGVSD	AY

Advanced option

Algorithm

Database

% Identity (BLAST)
% Similarity (FASTA) min max

ktup:1 (more sensitive)
2 (faster)

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Name

Description

Reference

IUIS

Alt s 1

Complete

Alt s 1 - M5BF91

10 TIASLFAAAG	20 LAAAAPLETR	30 QDTASCPVST	40 QGDYVWKISE	50 FYGRKPEGTY
60 YNSLGFNIKA	70 TNGGTLDFTC	80 SASADKLEDH	90 KWYSCGENSF	100 MDFSFDSDRS
110 GLLLKQKVSD	120 DITYVATTTL	130 PNYCRAGGNG	140 PKDFVCNGVS	DAY

Advanced option

Algorithm

Database

% Identity (BLAST)
% Similarity (FASTA) min max

ktup:1 (more sensitive)
2 (faster)

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Name

Description

Reference

IUIS

Alt s 1

Complete

Alt s 1 - M5BEB2

10 TTIASLFAAA	20 GLAAAAPLET	30 RQDTASCPVS	40 TQGDYVWKIS	50 EFYGRKPEGT
60 YYNSLGFNIK	70 ATNGGTLDFT	80 CSASADKLED	90 HKWYSCGENS	100 FMDFSFDSDR
110 SGLLLKQKVS	120 DDITYVATTT	130 LPNYCRAGGN	140 GPKDFVCNGV	SDA

Advanced option

Algorithm

Database

% Identity (BLAST)
% Similarity (FASTA) min max

ktup:1 (more sensitive)
2 (faster)

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Name

Description

Reference

IUIS

Alt s 1

Complete

Alt s 1 - M5BF92

10 HTIASLFAAA	20 GLAAAAPLET	30 RQDTASCPVS	40 TQGDYVWKIS	50 EFYGRKPEGT
60 YYNSLGFNIK	70 ATNGGTLDFT	80 CSASADKLED	90 HKWYSCGENS	100 FMDFSFDSDR
110 SGLLLKQKVS	120 DDITYVATTT	130 LPNYCRAGGN	140 GPKDFVCNGV	SDAY

Advanced option

Algorithm

Database

% Identity (BLAST)
% Similarity (FASTA) min max

ktup:1 (more sensitive)
2 (faster)

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Name

Description

Reference

IUIS

Alt s 1

Complete

Alt s 1 - M5BEZ7

10 TTIASLFAAA	20 GLAAAAPLET	30 RQDTASCPVS	40 TQGDYVWKIS	50 EFYGRKPEGT
60 YYNSLGFNIK	70 ATNGGTLDFT	80 CSASADKLED	90 HKWYSCGENS	100 FMDFSFDSDR
110 SGLLLKQKVS	120 DDITYVATTT	130 LPNYCRAGGN	140 GPKDFVCNGV	SDAY

Advanced option

Algorithm

Database

% Identity (BLAST)
% Similarity (FASTA) min max

ktup:1 (more sensitive)
2 (faster)

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Name

Description

Reference

IUIS

Alt s 1

Complete

Alt s 1 - M5BE72

10 AVTTIASLFA	20 AAGLAAAAPL	30 ETRQDTASCP	40 VSTQGDYVWK	50 ISEFYGRKPE
60 GTYYNSLGFN	70 IKATNGGTLD	80 FTCSASADKL	90 EDHKWYSCGE	100 NSFMDFSFDS
110 DRSGLLLKQK	120 VSDDITYVAT	130 TTLPNYCRAG	140 GNGPKDFVCN	GVSDAY

Advanced option

Algorithm

Database

% Identity (BLAST)
% Similarity (FASTA) min max

ktup:1 (more sensitive)
2 (faster)

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Name

Description

Reference

IUIS

Alt s 1

Partial

Alt s 1 - Q5EZA0

10 SLFAAAGLAA	20 AAPLETRQDT	30 ASCPVSTQGD	40 YVWKISEFYG	50 RKPEGTYYNS
60 LGFNIKATNG	70 GTLDFTCSAS	80 ADKLEDHKWY	90 SCGENSFMDF	100 SFDSDRSGLL
110 LKQKVSDDIT	120 YVATTTLPNY	130 CRAGGNGPKD	FVCTGVS

Advanced option

Algorithm

Database

% Identity (BLAST)
% Similarity (FASTA) min max

ktup:1 (more sensitive)
2 (faster)

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Name

Description

Reference

IUIS

Alt s 1

Partial

Alt s 1 - B2Z949

10 SLFAAAGLAA	20 AAPLETRQDT	30 ASCPVSTQGD	40 YVWKISEFYG	50 RKPEGTYYNS
60 LGFNIKATNG	70 GTLDFTCSAS	80 ANKLEDHKWY	90 SCGENSFMDF	100 SFDSDRSGLL
110 LRQKVSDDIT	120 YVATTTLPNY	130 CRAGGNGPKD	FVCTGVS

Advanced option

Algorithm

Database

% Identity (BLAST)
% Similarity (FASTA) min max

ktup:1 (more sensitive)
2 (faster)

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Name

Description

Reference

IUIS

Alt s 1

Partial

Alt s 1 - B2Z8Z9

10 SLFAAAGLAA	20 AAPLETRQDT	30 ASCPVSTQGD	40 YVWKISEFYG	50 RKPEGTYYNS
60 LGFNIKATNG	70 GTLDFTCSAS	80 ADKLEDHKWY	90 SCGENSFMDF	100 SFDSDRSGLL
110 LRQKVSDDIT	120 YVATTTLPNY	130 CRAGGNGPKD	FVCTGVS

Advanced option

Algorithm

Database

% Identity (BLAST)
% Similarity (FASTA) min max

ktup:1 (more sensitive)
2 (faster)

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Name

Description

Reference

IUIS

Alt s 1

Partial

Alt s 1 - D7NKJ5

10 FAAAGLAAAA	20 PLETRQDTAS	30 CPVSTQGDYV	40 WKISEFYGRK	50 PEGTYYNSLG
60 FNIKATNGGT	70 LDFTCSASAD	80 KLEDHKWYSC	90 GENSFMDFSF	100 DSDRSGLLLK
110 QKVSDDITYV	120 ATTTLPNYCR	130 AGGNGPKDFV	CNGVS

Advanced option

Algorithm

Database

% Identity (BLAST)
% Similarity (FASTA) min max

ktup:1 (more sensitive)
2 (faster)

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Name

Description

Reference

IUIS

Alt s 1

Partial

Alt s 1 - D6CHY8

10 EGDYVWKISE	20 FYGRKPEGTY	30 YNSLGFNIKA	40 TNGGTLDFTC	50 SALADKLEDH
60 KWYSCGENSF	70 MDFSFDSDRS	80 GLLLRQKVSD	90 DITYVATTTL	PNYCR

Advanced option

Algorithm

Database

% Identity (BLAST)
% Similarity (FASTA) min max

ktup:1 (more sensitive)
2 (faster)

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Matrix:

Gap open:

Gap extend:

Expectation upper value

Expectation lower value

Filter

Statistical model

Sequence Motifs

Name

Description

Reference

IUIS

INSCH007

Motif

INSCH

10 CPVSTQGDYV	20 WKISEFYGRK	30 PEGTYYNSLG	40 FNIKATNGGT	50 LDFTCSAQAD
60 KLEDHKWYSC	GENS


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